C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: serine/arginine repetitive matrix 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000144211 Srrm3-001 ENSMUSG00000039860 10090 + 5:135818106-135874772 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000144211
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000144211 0.024±0.01 0.012±0.01 13.422±0.55 0.027±0.01 0.018±0.00 0.015±0.00 0.009±0.00 0.027±0.01 0.034±0.00 0.036±0.02 0.145±0.00 0.053±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006NT CIL_0006NT_0002 CGP 5:135778480-135874772
CIL_0006NG CIL_0006NG_0002 CGP 5:135806890-135889563

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000464752 SRRM3-002 protein_coding Homo_sapiens 0 313
ENST00000479294 SRRM3-004 retained_intron Homo_sapiens 0 525
ENST00000611745 SRRM3-001 protein_coding Homo_sapiens 0 2119
ENST00000612155 SRRM3-003 retained_intron Homo_sapiens 0 357

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