C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: lin-54 homolog (C. elegans)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000144716 Lin54-004 ENSMUSG00000035310 10090 - 5:100484329-100498578 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENSMUST00000144716
Transcript ID Ovary
ENSMUST00000144716 0.951±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00052W CIL_00052W_0003 CGP 5:100441918-100547803

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000340417 LIN54-001 protein_coding Homo_sapiens 0 1493
ENST00000505397 LIN54-003 protein_coding Homo_sapiens 0 1168
ENST00000506560 LIN54-008 protein_coding Homo_sapiens 0 1399
ENST00000508171 LIN54-007 nonsense_mediated_decay Homo_sapiens 0 1402
ENST00000509748 LIN54-010 processed_transcript Homo_sapiens 0 976
ENST00000510877 LIN54-005 nonsense_mediated_decay Homo_sapiens 0 363

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