C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | lin-54 DREAM MuvB core complex component | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000508171  |
LIN54-007 |
ENSG00000189308 |
9606 | - |
4:82927586-83010710  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00052W | CIL_00052W_0002 | CGP | 4:82909973-83075818 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000086 | TAS | G2/M transition of mitotic cell cycle |
| GO:0000278 | TAS | mitotic cell cycle |
| GO:0003677 | IEA | DNA binding |
| GO:0005515 | IPI | protein binding |
| GO:0005654 | TAS | nucleoplasm |
| GO:0006351 | IEA | transcription, DNA-templated |
| GO:0006355 | IEA | regulation of transcription, DNA-templated |
| GO:0051726 | TAS | regulation of cell cycle |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000139234
|
Lin54-009 | nonsense_mediated_decay | Mus_musculus | 0 | 3334 |
|
ENSMUST00000046154
|
Lin54-001 | protein_coding | Mus_musculus | 0 | 1718 |
|
ENSMUST00000152387
|
Lin54-008 | protein_coding | Mus_musculus | 0 | 1718 |
|
ENSMUST00000154921
|
Lin54-007 | protein_coding | Mus_musculus | 0 | 1718 |
|
ENSMUST00000149714
|
Lin54-006 | protein_coding | Mus_musculus | 0 | 1718 |
|
ENSMUST00000137750
|
Lin54-005 | protein_coding | Mus_musculus | 0 | 1718 |
|
ENSMUST00000123572
|
Lin54-003 | protein_coding | Mus_musculus | 0 | 1718 |
|
ENSMUST00000144030
|
Lin54-002 | nonsense_mediated_decay | Mus_musculus | 0 | 1718 |
|
ENSMUST00000144716
|
Lin54-004 | retained_intron | Mus_musculus | 0 | 1402 |
|
ENSMUST00000134439
|
Lin54-010 | nonsense_mediated_decay | Mus_musculus | 0 | 475 |
