C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: microtubule-associated protein 1 light chain 3 alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000145086 Map1lc3a-002 ENSMUSG00000027602 10090 + 2:155276543-155278070 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaENSMUST00000145086
Transcript ID Brain Ovary Placenta
ENSMUST00000145086 41.463±0.00 29.248±5.47 16.959±1.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098F CIL_00098F_0002 VISTA 2:154750090-155352094
CIL_0006S0 CIL_0006S0_0003 CGP 2:155236533-155278073
CIL_0005BD CIL_0005BD_0002 CGP 2:155276297-155357430

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000360668 MAP1LC3A-002 protein_coding Homo_sapiens 0 494
ENST00000374837 MAP1LC3A-001 protein_coding Homo_sapiens 0 494
ENST00000397709 MAP1LC3A-003 protein_coding Homo_sapiens 0 394
ENST00000476428 MAP1LC3A-004 processed_transcript Homo_sapiens 0 610

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