| Transcript ID | Placenta | Testis |
|---|---|---|
| ENSMUST00000145518 | 73.414±0.00 | 13.344±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | structural maintenance of chromosomes 1A | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000145518  |
Smc1a-002 |
ENSMUSG00000041133 |
10090 | + |
X:152016428-152036212  |
nonsense_mediated_decay |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0001B1 | CIL_0001B1_0002 | CGP | X:152004582-152062694 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003682 | IDA | chromatin binding |
| GO:0006281 | IEA | DNA repair |
| GO:0007064 | IEA | mitotic sister chromatid cohesion |
| GO:0007126 | IPI | meiotic nuclear division |
| GO:0008280 | IEA | cohesin core heterodimer |
| GO:0019827 | IMP | stem cell maintenance |
| GO:0036033 | IDA | mediator complex binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSDART00000081016
|
smc1al-001 | protein_coding | Danio_rerio | 0 | 1177 |
|
ENST00000322213
|
SMC1A-001 | protein_coding | Homo_sapiens | 0 | 2206 |
|
ENST00000375340
|
SMC1A-201 | protein_coding | Homo_sapiens | 0 | 2206 |
|
ENST00000428014
|
SMC1A-003 | protein_coding | Homo_sapiens | 0 | 599 |
|
ENST00000463684
|
SMC1A-002 | nonsense_mediated_decay | Homo_sapiens | 0 | 1164 |
