C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ADP-ribosylation factor GTPase activating protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000145629 Arfgap1-003 ENSMUSG00000027575 10090 + 2:180967265-180982460 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000145629
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000145629 4.318±0.39 4.374±0.66 6.078±1.84 4.826±0.71 5.040±2.02 4.804±0.89 2.301±0.00 2.166±0.00 2.867±0.44 3.156±0.64 8.064±1.98 6.161±1.32 2.207±0.54

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00045A CIL_00045A_0002 CGP 2:180934772-180982526
CIL_00045B CIL_00045B_0002 CGP 2:180967225-181017540

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000353546 ARFGAP1-003 protein_coding Homo_sapiens 0 556
ENST00000370275 ARFGAP1-004 protein_coding Homo_sapiens 0 556
ENST00000370283 ARFGAP1-001 protein_coding Homo_sapiens 0 616
ENST00000395285 ARFGAP1-005 retained_intron Homo_sapiens 0 261
ENST00000468975 ARFGAP1-009 processed_transcript Homo_sapiens 0 420
ENST00000518601 ARFGAP1-016 protein_coding Homo_sapiens 0 320
ENST00000518618 ARFGAP1-019 processed_transcript Homo_sapiens 0 257
ENST00000518794 ARFGAP1-002 processed_transcript Homo_sapiens 0 420
ENST00000519273 ARFGAP1-201 protein_coding Homo_sapiens 0 616
ENST00000519531 ARFGAP1-014 retained_intron Homo_sapiens 0 556
ENST00000519604 ARFGAP1-202 protein_coding Homo_sapiens 0 427
ENST00000520485 ARFGAP1-008 nonsense_mediated_decay Homo_sapiens 0 616
ENST00000522403 ARFGAP1-015 protein_coding Homo_sapiens 0 547
ENST00000522959 ARFGAP1-011 retained_intron Homo_sapiens 0 464
ENST00000523460 ARFGAP1-012 protein_coding Homo_sapiens 0 351
ENST00000524192 ARFGAP1-013 retained_intron Homo_sapiens 0 556
ENST00000547204 ARFGAP1-007 protein_coding Homo_sapiens 0 427
ENST00000549047 ARFGAP1-021 protein_coding Homo_sapiens 0 531
ENST00000550188 ARFGAP1-006 protein_coding Homo_sapiens 0 464

Loading