C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 7846
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000145844 Gm7846-001 ENSMUSG00000086240 10090 - 1:28580499-28580772 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastLiverMusclePlacentaTestisENSMUST00000145844
Transcript ID Adipose Brain Breast Liver Muscle Placenta Testis
ENSMUST00000145844 0.667±0.29 0.211±0.13 0.958±0.00 1.205±0.94 0.265±0.00 0.049±0.00 0.366±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000223084 LSM5-002 nonsense_mediated_decay Homo_sapiens 0 318
ENST00000409292 LSM5-005 protein_coding Homo_sapiens 0 318
ENST00000409782 LSM5-009 protein_coding Homo_sapiens 0 313
ENST00000409909 LSM5-007 protein_coding Homo_sapiens 0 316
ENST00000409952 LSM5-008 protein_coding Homo_sapiens 0 316
ENST00000409987 LSM5-010 protein_coding Homo_sapiens 0 248
ENST00000410044 LSM5-004 protein_coding Homo_sapiens 0 316
ENST00000450169 LSM5-001 protein_coding Homo_sapiens 0 331
ENST00000468872 LSM5-006 retained_intron Homo_sapiens 3e-31 139
ENST00000480956 LSM5-003 retained_intron Homo_sapiens 0 195

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