C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: solute carrier family 46, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000146431 Slc46a1-002 ENSMUSG00000020829 10090 + 11:78465750-78471622 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainMusclePlacentaTestisENSMUST00000146431
Transcript ID Brain Muscle Placenta Testis
ENSMUST00000146431 8.072±0.00 0.311±0.10 5.674±4.93 0.150±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003LU CIL_0003LU_0002 CGP 11:78465697-78497754

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000585482 SARM1-001 protein_coding Homo_sapiens 0 206
ENST00000612814 SLC46A1-001 protein_coding Homo_sapiens 0 357
ENST00000618626 SLC46A1-002 protein_coding Homo_sapiens 0 278
ENST00000619923 SLC46A1-012 retained_intron Homo_sapiens 0 206

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