C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: breast carcinoma amplified sequence 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000147042 Bcas2-006 ENSMUSG00000005687 10090 + 3:103171785-103174547 retained_intron

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalENSMUST00000147042
Transcript ID Adrenal
ENSMUST00000147042 13.878±2.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003RY CIL_0003RY_0002 CGP 3:103102604-103179166
CIL_0006WV CIL_0006WV_0002 CGP 3:103171655-103358768

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000369541 BCAS2-001 protein_coding Homo_sapiens 0 444
ENST00000425064 BCAS2P2-001 processed_pseudogene Homo_sapiens 0 364
ENST00000485021 BCAS2-002 processed_transcript Homo_sapiens 0 206

Loading