C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: nephronophthisis 1 (juvenile) homolog (human)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000148033 Nphp1-003 ENSMUSG00000027378 10090 - 2:127745622-127754070 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonENSMUST00000148033
Transcript ID Colon
ENSMUST00000148033 1.280±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00047N CIL_00047N_0002 CGP 2:127704386-127788897
CIL_00047M CIL_00047M_0002 CGP 2:127740732-127792488

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000316534 NPHP1-002 protein_coding Homo_sapiens 0 217
ENST00000355301 NPHP1-004 protein_coding Homo_sapiens 0 217
ENST00000393272 NPHP1-001 protein_coding Homo_sapiens 0 217
ENST00000417665 NPHP1-007 protein_coding Homo_sapiens 0 217
ENST00000445609 NPHP1-011 protein_coding Homo_sapiens 0 217
ENST00000461707 NPHP1-006 retained_intron Homo_sapiens 0 217
ENST00000493051 NPHP1-009 retained_intron Homo_sapiens 0 244
ENST00000496524 NPHP1-005 retained_intron Homo_sapiens 0 244

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