C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: stem-loop binding protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000148153 Slbp-007 ENSMUSG00000004642 10090 - 5:33645628-33652338 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryENSMUST00000148153
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary
ENSMUST00000148153 6.467±2.35 20.482±5.56 24.863±11.89 23.082±8.09 2.237±0.00 6.718±4.87 2.074±0.45 12.647±4.47 49.999±13.64

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007TX CIL_0007TX_0002 VISTA 5:33275293-33875875
CIL_0006LX CIL_0006LX_0002 CGP 5:33600351-33652574
CIL_0006V4 CIL_0006V4_0002 CGP 5:33634952-33657977

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000318386 SLBP-004 protein_coding Homo_sapiens 0 250
ENST00000429429 SLBP-002 protein_coding Homo_sapiens 0 209
ENST00000480936 SLBP-006 protein_coding Homo_sapiens 0 222
ENST00000489418 SLBP-001 protein_coding Homo_sapiens 0 305

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