C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: valosin containing protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000148182 Vcp-002 ENSMUSG00000028452 10090 - 4:42993712-43000433 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonKidneyLiverLungOvaryENSMUST00000148182
Transcript ID Adrenal Breast Colon Kidney Liver Lung Ovary
ENSMUST00000148182 198.833±86.88 212.825±9.05 124.926±45.59 94.613±0.00 59.361±23.61 120.187±6.77 260.468±75.93

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002PW CIL_0002PW_0002 CGP 4:42949814-42983640
CIL_0005SG CIL_0005SG_0002 CGP 4:42969604-43000507
CIL_0005SF CIL_0005SF_0002 CGP 4:42979963-43010506

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000358901 VCP-001 protein_coding Homo_sapiens 0 440
ENST00000417448 VCP-004 protein_coding Homo_sapiens 0 440
ENST00000448530 VCP-006 protein_coding Homo_sapiens 0 440
ENST00000493886 VCP-005 retained_intron Homo_sapiens 0 440

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