C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: nebulin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000148356 Neb-012 ENSMUSG00000026950 10090 - 2:52178046-52192520 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastENSMUST00000148356
Transcript ID Breast
ENSMUST00000148356 0.148±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003S6 CIL_0003S6_0003 CGP 2:52072837-52338798
CIL_0003RZ CIL_0003RZ_0003 CGP 2:52136647-52424901

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005865 TAS striated muscle thin filament
GO:0030018 IDA Z disc
GO:0030832 TAS regulation of actin filament length
GO:0043234 ISO protein complex
GO:0043292 IDA contractile fiber
GO:0045214 TAS sarcomere organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000172853 NEB-201 protein_coding Homo_sapiens 0 752
ENST00000397345 NEB-202 protein_coding Homo_sapiens 0 1338
ENST00000409198 NEB-001 protein_coding Homo_sapiens 0 752
ENST00000413693 NEB-002 protein_coding Homo_sapiens 0 752
ENST00000420924 NEB-006 protein_coding Homo_sapiens 0 972
ENST00000427231 NEB-203 protein_coding Homo_sapiens 0 752
ENST00000603639 NEB-017 protein_coding Homo_sapiens 0 1338
ENST00000604864 NEB-018 protein_coding Homo_sapiens 0 752
ENST00000618972 NEB-204 protein_coding Homo_sapiens 0 752

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