C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear factor I/A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000148930 Nfia-007 ENSMUSG00000028565 10090 + 4:97880119-98065355 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryTestisENSMUST00000148930
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary Testis
ENSMUST00000148930 26.915±4.53 20.759±2.94 25.736±4.32 10.645±2.05 18.349±1.70 13.720±3.82 7.453±4.44 18.518±1.43 30.983±11.73 2.508±0.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007OH CIL_0007OH_0002 UCNEbase 4:96979874-98319114
CIL_0001NA CIL_0001NA_0002 CGP 4:97772734-98383306

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000357977 NFIA-008 protein_coding Homo_sapiens 0 363
ENST00000371184 NFIA-006 protein_coding Homo_sapiens 0 564
ENST00000371185 NFIA-005 protein_coding Homo_sapiens 0 1053
ENST00000371187 NFIA-003 protein_coding Homo_sapiens 0 1173
ENST00000371189 NFIA-015 protein_coding Homo_sapiens 0 1173
ENST00000371191 NFIA-002 protein_coding Homo_sapiens 0 1173
ENST00000403491 NFIA-001 protein_coding Homo_sapiens 0 1173
ENST00000407417 NFIA-014 protein_coding Homo_sapiens 0 1173
ENST00000476646 NFIA-013 protein_coding Homo_sapiens 0 241
ENST00000479364 NFIA-009 processed_transcript Homo_sapiens 0 1171
ENST00000482020 NFIA-010 protein_coding Homo_sapiens 0 577
ENST00000485903 NFIA-007 protein_coding Homo_sapiens 0 616

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