C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neutral sphingomyelinase (N-SMase) activation associated factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000149015 Nsmaf-010 ENSMUSG00000028245 10090 - 4:6396411-6399006 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000149015
Transcript ID Testis
ENSMUST00000149015 5.947±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001T7 CIL_0001T7_0002 CGP 4:6265612-6408423
CIL_0002RG CIL_0002RG_0002 CGP 4:6365650-6454271
CIL_0001SZ CIL_0001SZ_0002 CGP 4:6396207-6991557

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000038176 NSMAF-001 protein_coding Homo_sapiens 0 708
ENST00000427130 NSMAF-002 protein_coding Homo_sapiens 0 708
ENST00000521972 NSMAF-011 retained_intron Homo_sapiens 0 433

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