C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002RG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000137575-ENSG00000035681 CGP 9606 8:58552924-58659844
GeneTranscriptPositionBiotype
ENSG00000035681 (NSMAF)
neutral sphingomyelinase (N-SMase) activation associated factor 		ENST00000038176 (NSMAF-001) 58583504-58659844 protein_coding
ENST00000427130 (NSMAF-002) 58583770-58659534 protein_coding
ENST00000517612 (NSMAF-010) 58586349-58591009 retained_intron
ENST00000518159 (NSMAF-003) 58623751-58659664 nonsense_mediated_decay
ENST00000518229 (NSMAF-004) 58623747-58659638 nonsense_mediated_decay
ENST00000519166 (NSMAF-009) 58589522-58594300 retained_intron
ENST00000519174 (NSMAF-014) 58590866-58594747 retained_intron
ENST00000519227 (NSMAF-006) 58597473-58600178 retained_intron
ENST00000519858 (NSMAF-012) 58601168-58623419 processed_transcript
ENST00000519871 (NSMAF-017) 58631428-58659214 retained_intron
ENST00000521712 (NSMAF-015) 58586359-58589656 retained_intron
ENST00000521972 (NSMAF-011) 58583809-58586578 retained_intron
ENST00000522645 (NSMAF-005) 58631365-58659698 retained_intron
ENST00000523106 (NSMAF-007) 58590001-58599480 retained_intron
ENST00000523177 (NSMAF-013) 58587649-58595902 processed_transcript
ENST00000523982 (NSMAF-016) 58597403-58600178 processed_transcript
ENST00000524148 (NSMAF-008) 58589752-58594878 retained_intron
ENSG00000137575 (SDCBP)
syndecan binding protein (syntenin) 		ENST00000260130 (SDCBP-001) 58553169-58582860 protein_coding
ENST00000413219 (SDCBP-002) 58553217-58582830 protein_coding
ENST00000424270 (SDCBP-004) 58553237-58582056 protein_coding
ENST00000447182 (SDCBP-003) 58553216-58582846 protein_coding
ENST00000447267 (SDCBP-012) 58565016-58581759 protein_coding
ENST00000519115 (SDCBP-013) 58553261-58578384 retained_intron
ENST00000520168 (SDCBP-006) 58553255-58582053 protein_coding
ENST00000520228 (SDCBP-009) 58570712-58578070 retained_intron
ENST00000522243 (SDCBP-008) 58552924-58572301 processed_transcript
ENST00000522843 (SDCBP-010) 58553262-58576366 retained_intron
ENST00000523441 (SDCBP-011) 58577993-58579949 retained_intron
ENST00000523483 (SDCBP-005) 58553254-58582858 protein_coding
ENSG00000242970 (AC068522.4)
 ENST00000482895 (AC068522.4-001) 58588420-58588764 processed_pseudogene
CIL_0002RG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028249-ENSMUSG00000028245 CGP 10090 4:6365650-6454271
GeneTranscriptPositionBiotype
ENSMUSG00000028245 (Nsmaf)
neutral sphingomyelinase (N-SMase) activation associated factor 		ENSMUST00000029910 (Nsmaf-001) 6396207-6454271 protein_coding
ENSMUST00000124344 (Nsmaf-011) 6433272-6454097 protein_coding
ENSMUST00000124656 (Nsmaf-008) 6437913-6444393 processed_transcript
ENSMUST00000143566 (Nsmaf-003) 6406400-6454255 processed_transcript
ENSMUST00000143704 (Nsmaf-002) 6396207-6454271 retained_intron
ENSMUST00000143983 (Nsmaf-009) 6424570-6432698 retained_intron
ENSMUST00000145399 (Nsmaf-005) 6429729-6446327 processed_transcript
ENSMUST00000149015 (Nsmaf-010) 6396411-6399006 retained_intron
ENSMUST00000156078 (Nsmaf-004) 6409019-6423988 retained_intron
ENSMUST00000156283 (Nsmaf-007) 6428450-6453579 processed_transcript
ENSMUST00000156715 (Nsmaf-006) 6396769-6454096 processed_transcript
ENSMUSG00000028249 (Sdcbp)
syndecan binding protein 		ENSMUST00000029912 (Sdcbp-001) 6365650-6396284 protein_coding
ENSMUST00000103008 (Sdcbp-002) 6365677-6395655 protein_coding
ENSMUST00000108371 (Sdcbp-006) 6365712-6384222 processed_transcript
ENSMUST00000108374 (Sdcbp-003) 6365713-6408423 protein_coding
ENSMUST00000140830 (Sdcbp-007) 6365713-6385057 protein_coding
ENSMUST00000153861 (Sdcbp-005) 6376841-6392995 protein_coding
ENSMUST00000155247 (Sdcbp-004) 6365708-6374128 processed_transcript
ENSMUST00000175769 (Sdcbp-008) 6365709-6393111 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002RG_0001ENSG00000035681ENST00000038176ENST00000427130ENST00000519227ENST00000519858ENST00000522645ENSG00000137575ENST00000260130ENST00000413219ENST00000424270ENST00000447182ENST00000447267ENST00000519115ENST00000520228ENST00000522843ENSG00000242970ENST00000482895CIL_0002RG_0002ENSMUSG00000028245ENSMUST00000029910ENSMUST00000149015ENSMUSG00000028249ENSMUST00000029912ENSMUST00000103008ENSMUST00000175769
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000035681 ENST00000038176 5.750±0.00 6.152±0.00 1.132±0.00 1.258±0.00 2.921±1.91 4.016±0.48 2.510±1.50 1.356±0.74 0.764±0.00 3.515±0.11 2.927±0.00 3.340±1.27 3.677±1.28 2.411±1.16
ENST00000427130 1.866±0.00 N/A N/A N/A 1.042±0.29 N/A 0.623±0.00 1.675±0.00 N/A N/A 0.798±0.00 N/A 1.045±0.22 0.805±0.00
ENST00000517612 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518159 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518229 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519166 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519174 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519227 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.668±0.00
ENST00000519858 N/A N/A 3.054±0.00 5.733±0.00 4.118±0.00 N/A N/A 1.367±0.00 7.217±0.00 6.001±0.00 8.037±0.00 8.263±0.00 N/A N/A
ENST00000519871 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521712 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521972 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522645 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.123±0.00 N/A N/A N/A
ENST00000523106 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523177 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523982 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524148 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000137575 ENST00000260130 47.072±0.00 27.546±0.00 N/A 14.568±0.00 33.881±0.00 32.431±0.00 7.171±0.00 8.824±0.00 3.702±0.00 49.309±0.00 4.005±0.00 15.567±8.50 14.264±2.39 20.945±0.00
ENST00000413219 N/A 9.179±0.00 N/A N/A 5.648±0.00 N/A 12.665±0.00 12.824±9.96 6.273±0.00 17.511±8.98 5.445±0.00 28.228±0.00 55.519±2.44 7.017±0.00
ENST00000424270 52.704±0.00 14.841±0.00 2.508±0.00 17.339±0.00 19.882±0.00 15.747±7.91 5.984±0.00 4.834±0.00 N/A N/A 4.184±1.62 20.060±9.10 88.209±0.00 9.639±0.00
ENST00000447182 42.804±0.00 20.402±0.00 3.280±0.00 13.177±6.61 18.682±6.62 24.298±18.04 13.278±9.20 12.298±8.80 7.130±1.28 38.902±19.32 4.504±1.20 14.465±5.15 35.755±6.79 13.591±4.84
ENST00000447267 N/A N/A N/A N/A N/A N/A N/A 4.799±0.00 N/A N/A N/A N/A N/A 6.283±0.00
ENST00000519115 N/A N/A N/A 7.408±0.00 9.582±0.00 N/A N/A 8.882±0.00 N/A 25.903±0.00 N/A N/A N/A N/A
ENST00000520168 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520228 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.566±0.00
ENST00000522243 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522843 N/A N/A 3.915±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523441 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523483 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000242970 ENST00000482895 N/A 0.057±0.00 N/A 0.061±0.00 0.245±0.00 N/A N/A 0.059±0.00 0.052±0.00 0.055±0.00 N/A 0.123±0.00 0.121±0.00 0.123±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028245 ENSMUST00000029910 11.441±3.61 10.962±2.23 20.144±3.08 10.839±2.18 15.630±1.41 7.669±1.65 11.045±1.97 9.002±0.48 10.822±7.76 15.237±1.41 10.901±2.63 22.434±2.79 9.794±0.80 3.016±0.92
ENSMUST00000124344 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124656 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143566 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143704 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143983 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145399 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149015 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.947±0.00
ENSMUST00000156078 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156283 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156715 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000028249 ENSMUST00000029912 15.734±3.53 14.615±2.57 17.724±0.61 11.293±0.99 13.045±2.79 13.311±2.38 6.209±0.10 11.166±1.26 9.933±7.79 17.582±0.13 3.013±0.00 15.093±1.61 16.173±7.62 N/A
ENSMUST00000103008 44.647±7.87 14.723±2.79 71.873±6.17 32.997±12.13 30.974±8.28 23.121±3.81 24.185±3.82 28.535±3.03 37.502±28.88 49.501±7.43 11.544±2.20 34.005±13.47 52.534±24.27 12.199±5.03
ENSMUST00000108371 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000108374 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140830 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153861 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155247 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000175769 N/A N/A N/A 88.054±0.00 N/A N/A N/A N/A N/A N/A N/A 125.124±0.00 103.265±14.18 15.981±0.00

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