C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0001SZ_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000035681-ENSG00000198846 | CGP | 9606 | 8:58583504-59119208  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000035681  (NSMAF)neutral sphingomyelinase (N-SMase) activation associated factor |
ENST00000038176 (NSMAF-001)
|
58583504-58659844 | protein_coding | |
|
ENST00000427130 (NSMAF-002)
|
58583770-58659534 | protein_coding | ||
|
ENST00000517612 (NSMAF-010)
|
58586349-58591009 | retained_intron | ||
|
ENST00000518159 (NSMAF-003)
|
58623751-58659664 | nonsense_mediated_decay | ||
|
ENST00000518229 (NSMAF-004)
|
58623747-58659638 | nonsense_mediated_decay | ||
|
ENST00000519166 (NSMAF-009)
|
58589522-58594300 | retained_intron | ||
|
ENST00000519174 (NSMAF-014)
|
58590866-58594747 | retained_intron | ||
|
ENST00000519227 (NSMAF-006)
|
58597473-58600178 | retained_intron | ||
|
ENST00000519858 (NSMAF-012)
|
58601168-58623419 | processed_transcript | ||
|
ENST00000519871 (NSMAF-017)
|
58631428-58659214 | retained_intron | ||
|
ENST00000521712 (NSMAF-015)
|
58586359-58589656 | retained_intron | ||
|
ENST00000521972 (NSMAF-011)
|
58583809-58586578 | retained_intron | ||
|
ENST00000522645 (NSMAF-005)
|
58631365-58659698 | retained_intron | ||
|
ENST00000523106 (NSMAF-007)
|
58590001-58599480 | retained_intron | ||
|
ENST00000523177 (NSMAF-013)
|
58587649-58595902 | processed_transcript | ||
|
ENST00000523982 (NSMAF-016)
|
58597403-58600178 | processed_transcript | ||
|
ENST00000524148 (NSMAF-008)
|
58589752-58594878 | retained_intron | ||
|
ENSG00000167912 (RP11-25K19.1) |
ENST00000517898 (RP11-25K19.1-002)
|
59119946-59121315 | antisense | |
|
ENST00000518993 (RP11-25K19.1-001)
|
59119218-59121346 | antisense | ||
|
ENST00000523683 (RP11-25K19.1-003)
|
59119040-59120031 | antisense | ||
|
ENSG00000198846 (TOX) thymocyte selection-associated high mobility group box |
ENST00000361421 (TOX-001)
|
58805418-59119208 | protein_coding | |
|
ENSG00000242970 (AC068522.4) |
ENST00000482895 (AC068522.4-001)
|
58588420-58588764 | processed_pseudogene | |
|
ENSG00000254048 (RP11-328K2.1) |
ENST00000518011 (RP11-328K2.1-001)
|
58991720-58992938 | sense_intronic | |
| CIL_0001SZ_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000028245-ENSMUSG00000041272 | CGP | 10090 | 4:6396207-6991557 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000028245 (Nsmaf) neutral sphingomyelinase (N-SMase) activation associated factor |
ENSMUST00000029910 (Nsmaf-001)
|
6396207-6454271 | protein_coding | |
|
ENSMUST00000124344 (Nsmaf-011)
|
6433272-6454097 | protein_coding | ||
|
ENSMUST00000124656 (Nsmaf-008)
|
6437913-6444393 | processed_transcript | ||
|
ENSMUST00000143566 (Nsmaf-003)
|
6406400-6454255 | processed_transcript | ||
|
ENSMUST00000143704 (Nsmaf-002)
|
6396207-6454271 | retained_intron | ||
|
ENSMUST00000143983 (Nsmaf-009)
|
6424570-6432698 | retained_intron | ||
|
ENSMUST00000145399 (Nsmaf-005)
|
6429729-6446327 | processed_transcript | ||
|
ENSMUST00000149015 (Nsmaf-010)
|
6396411-6399006 | retained_intron | ||
|
ENSMUST00000156078 (Nsmaf-004)
|
6409019-6423988 | retained_intron | ||
|
ENSMUST00000156283 (Nsmaf-007)
|
6428450-6453579 | processed_transcript | ||
|
ENSMUST00000156715 (Nsmaf-006)
|
6396769-6454096 | processed_transcript | ||
|
ENSMUSG00000028249 (Sdcbp) syndecan binding protein |
ENSMUST00000029912 (Sdcbp-001)
|
6365650-6396284 | protein_coding | |
|
ENSMUST00000103008 (Sdcbp-002)
|
6365677-6395655 | protein_coding | ||
|
ENSMUST00000108371 (Sdcbp-006)
|
6365712-6384222 | processed_transcript | ||
|
ENSMUST00000108374 (Sdcbp-003)
|
6365713-6408423 | protein_coding | ||
|
ENSMUST00000140830 (Sdcbp-007)
|
6365713-6385057 | protein_coding | ||
|
ENSMUST00000153861 (Sdcbp-005)
|
6376841-6392995 | protein_coding | ||
|
ENSMUST00000155247 (Sdcbp-004)
|
6365708-6374128 | processed_transcript | ||
|
ENSMUST00000175769 (Sdcbp-008)
|
6365709-6393111 | protein_coding | ||
|
ENSMUSG00000041272 (Tox) thymocyte selection-associated high mobility group box |
ENSMUST00000039987 (Tox-001)
|
6686353-6990799 | protein_coding | |
|
ENSMUST00000125974 (Tox-003)
|
6688046-6689351 | processed_transcript | ||
|
ENSMUST00000147657 (Tox-002)
|
6740230-6991557 | retained_intron | ||
|
ENSMUST00000150082 (Tox-004)
|
6820694-6990483 | retained_intron | ||
|
ENSMUSG00000081388 (Gm11801) predicted gene 11801 |
ENSMUST00000117807 (Gm11801-001)
|
6539561-6540306 | processed_pseudogene | |
|
ENSMUSG00000086052 (Gm11802) predicted gene 11802 |
ENSMUST00000137749 (Gm11802-001)
|
6688169-6704160 | antisense | |
Expression Patterns
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