| Transcript ID | Brain |
|---|---|
| ENSMUST00000149235 | 57.845±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | phosphatase and actin regulator 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000149235  |
Phactr1-008 |
ENSMUSG00000054728 |
10090 | + |
13:42681513-43135245  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0003IC | CIL_0003IC_0002 | CGP | 13:42301270-43138526 |
| CIL_0001BV | CIL_0001BV_0003 | CGP | 13:42680623-43171501 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003779 | IDA | actin binding |
| GO:0004864 | IEA | protein phosphatase inhibitor activity |
| GO:0005634 | IDA | nucleus |
| GO:0005829 | IDA | cytosol |
| GO:0030054 | IEA | cell junction |
| GO:0031032 | IMP | actomyosin structure organization |
| GO:0031532 | IMP | actin cytoskeleton reorganization |
| GO:0043086 | IEA | negative regulation of catalytic activity |
| GO:0043149 | IMP | stress fiber assembly |
| GO:0045202 | IEA | synapse |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000332995
|
PHACTR1-005 | protein_coding | Homo_sapiens | 0 | 2313 |
|
ENST00000379329
|
PHACTR1-004 | protein_coding | Homo_sapiens | 0 | 351 |
|
ENST00000379335
|
PHACTR1-003 | protein_coding | Homo_sapiens | 0 | 525 |
|
ENST00000379348
|
PHACTR1-010 | protein_coding | Homo_sapiens | 0 | 394 |
|
ENST00000379350
|
PHACTR1-001 | protein_coding | Homo_sapiens | 0 | 1886 |
|
ENST00000406205
|
PHACTR1-006 | protein_coding | Homo_sapiens | 0 | 736 |
|
ENST00000415087
|
PHACTR1-201 | protein_coding | Homo_sapiens | 0 | 1923 |
|
ENST00000489548
|
PHACTR1-009 | processed_transcript | Homo_sapiens | 0 | 405 |
|
ENST00000502313
|
HMGB1P21-001 | processed_pseudogene | Homo_sapiens | 0.0001 | 53 |
