C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear receptor subfamily 5, group A, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000149690 Nr5a1-002 ENSMUSG00000026751 10090 - 2:38701322-38711188 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderColonKidneyLungOvaryPlacentaENSMUST00000149690
Transcript ID Adipose Bladder Colon Kidney Lung Ovary Placenta
ENSMUST00000149690 0.015±0.00 0.008±0.00 0.034±0.00 0.014±0.00 0.029±0.00 16.750±0.00 0.003±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008N3 CIL_0008N3_0002 VISTA 2:38235055-38837083
CIL_00098L CIL_00098L_0002 VISTA 2:38294702-38895720
CIL_00075I CIL_00075I_0002 CGP 2:38692656-38927688

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000243050 NR4A1-201 protein_coding Homo_sapiens 0.00000000000002 86
ENST00000360284 NR4A1-202 protein_coding Homo_sapiens 0.00000000000002 86
ENST00000373588 NR5A1-001 protein_coding Homo_sapiens 0 1225
ENST00000394824 NR4A1-002 protein_coding Homo_sapiens 0.00000000000002 86
ENST00000394825 NR4A1-203 protein_coding Homo_sapiens 0.00000000000002 86
ENST00000455734 NR5A1-003 protein_coding Homo_sapiens 0 701
ENST00000545748 NR4A1-003 protein_coding Homo_sapiens 0.00000000000002 86
ENST00000550082 NR4A1-004 protein_coding Homo_sapiens 0.00000000000001 86
ENST00000620110 NR5A1-201 protein_coding Homo_sapiens 0 1066

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