C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00075I_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000136931-ENSG00000148200 CGP 9606 9:124481236-124771310
GeneTranscriptPositionBiotype
ENSG00000136931 (NR5A1)
nuclear receptor subfamily 5, group A, member 1 		ENST00000373587 (NR5A1-002) 124482728-124500986 protein_coding
ENST00000373588 (NR5A1-001) 124481237-124507430 protein_coding
ENST00000455734 (NR5A1-003) 124500427-124507235 protein_coding
ENST00000620110 (NR5A1-201) 124481236-124507420 protein_coding
ENSG00000148200 (NR6A1)
nuclear receptor subfamily 6, group A, member 1 		ENST00000344523 (NR6A1-004) 124522467-124771287 protein_coding
ENST00000373584 (NR6A1-003) 124522424-124771297 protein_coding
ENST00000416460 (NR6A1-002) 124522426-124771310 protein_coding
ENST00000475178 (NR6A1-005) 124538092-124595808 protein_coding
ENST00000487099 (NR6A1-001) 124517275-124771277 protein_coding
ENSG00000207595 (MIR181A2)
microRNA 181a-2 		ENST00000384863 (MIR181A2-201) 124692442-124692551 miRNA
ENSG00000207737 (MIR181B2)
microRNA 181b-2 		ENST00000385004 (MIR181B2-201) 124693710-124693798 miRNA
ENSG00000224020 (MIR181A2HG)
MIR181A2 host gene (non-protein coding) 		ENST00000429139 (MIR181A2HG-001) 124658467-124698631 antisense
ENSG00000231744 (RP11-164H5.1)
 ENST00000440419 (RP11-164H5.1-001) 124598707-124599580 processed_pseudogene
ENSG00000236643 (RP11-175D17.3)
 ENST00000438380 (RP11-175D17.3-001) 124770123-124772927 antisense
ENSG00000241246 (RN7SL302P)
RNA, 7SL, cytoplasmic 302, pseudogene 		ENST00000475999 (RN7SL302P-201) 124607159-124607458 misc_RNA
CIL_00075I_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026751-ENSMUSG00000063972 CGP 10090 2:38692656-38927688
GeneTranscriptPositionBiotype
ENSMUSG00000026751 (Nr5a1)
nuclear receptor subfamily 5, group A, member 1 		ENSMUST00000028084 (Nr5a1-003) 38692660-38714542 protein_coding
ENSMUST00000112883 (Nr5a1-001) 38692656-38712234 protein_coding
ENSMUST00000149690 (Nr5a1-002) 38701322-38711188 retained_intron
ENSMUSG00000063972 (Nr6a1)
nuclear receptor subfamily 6, group A, member 1 		ENSMUST00000076275 (Nr6a1-201) 38723374-38926217 protein_coding
ENSMUST00000112877 (Nr6a1-001) 38723370-38927688 protein_coding
ENSMUST00000123099 (Nr6a1-005) 38781920-38784469 processed_transcript
ENSMUST00000123342 (Nr6a1-008) 38737597-38740464 processed_transcript
ENSMUST00000128688 (Nr6a1-007) 38738727-38742957 processed_transcript
ENSMUST00000132636 (Nr6a1-004) 38740424-38785111 processed_transcript
ENSMUST00000142113 (Nr6a1-003) 38739135-38784520 protein_coding
ENSMUST00000142130 (Nr6a1-002) 38740543-38926275 protein_coding
ENSMUST00000156301 (Nr6a1-006) 38742441-38784469 processed_transcript
ENSMUST00000168098 (Nr6a1-202) 38723374-38784515 protein_coding
ENSMUSG00000082508 (Rpl15-ps4)
ribosomal protein L15, pseudogene 4 		ENSMUST00000122372 (Rpl15-ps4-001) 38777736-38778341 processed_pseudogene
ENSMUSG00000085201 (Nr6a1os)
nuclear receptor subfamily 6, group A, member 1, opposite strand 		ENSMUST00000129089 (Nr6a1os-002) 38823257-38838600 antisense
ENSMUST00000151229 (Nr6a1os-001) 38823341-38852370 antisense
ENSMUSG00000087164 (Nr5a1os)
nuclear receptor subfamily 5, group A, member 1, opposite strand 		ENSMUST00000146954 (Nr5a1os-001) 38712676-38720638 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00075I_0001ENSG00000136931ENST00000373587ENST00000373588ENST00000455734ENST00000620110ENSG00000148200ENST00000344523ENST00000373584ENST00000416460ENST00000475178ENST00000487099ENSG00000207595ENST00000384863ENSG00000207737ENST00000385004ENSG00000224020ENST00000429139ENSG00000231744ENST00000440419ENSG00000236643ENST00000438380ENSG00000241246ENST00000475999CIL_00075I_0002ENSMUSG00000026751ENSMUST00000028084ENSMUST00000112883ENSMUST00000149690ENSMUSG00000063972ENSMUST00000076275ENSMUST00000112877ENSMUST00000123099ENSMUST00000123342ENSMUST00000128688ENSMUST00000132636ENSMUST00000142113ENSMUST00000142130ENSMUST00000156301ENSMUST00000168098ENSMUSG00000082508ENSMUST00000122372ENSMUSG00000085201ENSMUST00000129089ENSMUST00000151229ENSMUSG00000087164ENSMUST00000146954
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00075I_0001ENSG00000136931ENST00000373587ENST00000373588ENST00000455734ENST00000620110ENSG00000148200ENST00000344523ENST00000416460ENST00000475178ENST00000487099ENSG00000207595ENST00000384863ENSG00000207737ENST00000385004ENSG00000224020ENST00000429139ENSG00000231744ENST00000440419ENSG00000236643ENST00000438380ENSG00000241246ENST00000475999CIL_00075I_0002ENSMUSG00000026751ENSMUST00000028084ENSMUST00000112883ENSMUST00000149690ENSMUSG00000063972ENSMUST00000076275ENSMUST00000112877ENSMUST00000128688ENSMUST00000142130ENSMUST00000168098ENSMUSG00000082508ENSMUST00000122372ENSMUSG00000085201ENSMUST00000129089ENSMUST00000151229ENSMUSG00000087164ENSMUST00000146954
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000136931 ENST00000373587 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.116±0.00 N/A
ENST00000373588 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.830±13.29 N/A 6.711±1.93
ENST00000455734 N/A 0.135±0.00 N/A N/A 0.267±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000620110 N/A N/A N/A N/A N/A N/A N/A 0.030±0.00 0.053±0.00 0.009±0.00 N/A 0.227±0.00 N/A 3.485±0.00
ENSG00000148200 ENST00000344523 N/A N/A N/A N/A N/A N/A 0.163±0.00 0.224±0.00 N/A N/A 0.206±0.00 N/A N/A N/A
ENST00000373584 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000416460 N/A N/A N/A 0.178±0.00 N/A N/A 0.215±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000475178 N/A N/A 1.224±0.00 N/A 1.308±0.00 N/A 0.193±0.00 N/A N/A 1.161±0.00 0.915±0.00 1.886±0.00 N/A N/A
ENST00000487099 N/A N/A N/A 0.375±0.00 0.135±0.00 0.317±0.00 0.027±0.00 0.661±0.00 0.375±0.00 N/A 0.124±0.00 0.654±0.00 N/A 16.120±6.70
ENSG00000207595 ENST00000384863 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.702±0.00
ENSG00000207737 ENST00000385004 N/A N/A N/A N/A N/A N/A 0.260±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000224020 ENST00000429139 0.056±0.00 0.113±0.00 0.632±0.00 0.432±0.14 0.018±0.00 0.118±0.00 N/A 0.128±0.04 0.792±0.00 0.579±0.05 N/A 0.562±0.10 0.139±0.01 0.101±0.00
ENSG00000231744 ENST00000440419 N/A 0.028±0.00 0.879±0.00 0.319±0.00 N/A 0.444±0.00 0.282±0.00 N/A 0.329±0.00 N/A N/A 0.160±0.15 N/A 0.132±0.06
ENSG00000236643 ENST00000438380 N/A N/A N/A N/A N/A N/A 0.078±0.00 0.224±0.00 N/A N/A N/A 0.278±0.17 N/A 0.325±0.00
ENSG00000241246 ENST00000475999 N/A N/A N/A N/A N/A N/A N/A 0.070±0.00 N/A N/A N/A N/A N/A 0.187±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026751 ENSMUST00000028084 0.013±0.00 448.610±125.40 0.003±0.00 N/A 0.004±0.00 0.013±0.00 0.056±0.00 0.487±0.29 0.008±0.00 0.013±0.01 N/A 127.366±42.91 0.037±0.02 9.255±3.25
ENSMUST00000112883 0.010±0.01 N/A 0.003±0.00 0.237±0.22 0.014±0.01 0.015±0.01 0.034±0.03 0.013±0.00 0.005±0.00 0.001±0.00 N/A N/A 0.042±0.03 N/A
ENSMUST00000149690 0.015±0.00 N/A 0.008±0.00 N/A N/A 0.034±0.00 N/A 0.014±0.00 N/A 0.029±0.00 N/A 16.750±0.00 0.003±0.00 N/A
ENSMUSG00000063972 ENSMUST00000076275 0.445±0.28 0.736±0.22 0.365±0.14 1.096±0.27 0.396±0.17 1.110±0.00 0.262±0.04 0.240±0.05 0.292±0.17 N/A 0.303±0.09 0.919±0.08 3.903±1.83 12.385±7.83
ENSMUST00000112877 0.829±0.41 0.864±0.60 0.602±0.01 0.658±0.28 0.511±0.29 0.955±0.50 0.138±0.02 0.682±0.19 0.563±0.41 0.858±0.18 0.154±0.00 2.112±0.95 1.852±0.37 23.102±10.08
ENSMUST00000123099 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000123342 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128688 N/A 1.470±0.00 N/A N/A 1.457±0.53 N/A 0.454±0.00 N/A N/A N/A N/A 2.423±0.03 N/A 60.870±3.88
ENSMUST00000132636 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142113 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142130 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 60.115±0.00
ENSMUST00000156301 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168098 N/A 0.942±0.35 N/A N/A 0.183±0.00 0.891±0.00 N/A 0.805±0.00 0.669±0.50 N/A 0.522±0.13 1.364±0.17 1.085±0.05 N/A
ENSMUSG00000082508 ENSMUST00000122372 N/A 0.256±0.00 0.026±0.01 0.069±0.00 0.197±0.00 N/A N/A 0.141±0.04 0.116±0.13 N/A N/A 0.639±0.25 N/A 0.188±0.00
ENSMUSG00000085201 ENSMUST00000129089 0.192±0.00 N/A N/A 1.598±0.00 0.303±0.12 N/A 0.255±0.04 0.143±0.01 0.051±0.03 0.171±0.00 N/A 0.332±0.20 0.034±0.00 N/A
ENSMUST00000151229 N/A N/A N/A 0.678±0.00 N/A N/A 0.257±0.08 0.101±0.00 0.121±0.06 N/A 0.606±0.40 0.598±0.27 0.138±0.00 0.377±0.00
ENSMUSG00000087164 ENSMUST00000146954 N/A 0.461±0.23 0.020±0.00 0.029±0.00 N/A N/A N/A 0.048±0.00 0.057±0.00 N/A N/A 0.289±0.11 0.013±0.00 0.155±0.09

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