C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | TNF receptor-associated protein 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000150354  |
Trap1-003 |
ENSMUSG00000005981 |
10090 | - |
16:4056416-4077775  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0000AY | CIL_0000AY_0002 | CGP | 16:3979105-4040024 |
| CIL_0000ON | CIL_0000ON_0002 | CGP | 16:4036942-4077827 |
| CIL_00029G | CIL_00029G_0003 | CGP | 16:4039971-4213407 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000246957
|
TRAP1-001 | protein_coding | Homo_sapiens | 0 | 193 |
|
ENST00000538171
|
TRAP1-003 | protein_coding | Homo_sapiens | 0 | 193 |
|
ENST00000573872
|
TRAP1-012 | processed_transcript | Homo_sapiens | 0 | 193 |
|
ENST00000574175
|
TRAP1-013 | nonsense_mediated_decay | Homo_sapiens | 9e-21 | 104 |
|
ENST00000575671
|
TRAP1-004 | protein_coding | Homo_sapiens | 0 | 193 |
|
ENST00000575854
|
TRAP1-011 | processed_transcript | Homo_sapiens | 0 | 193 |
|
ENST00000576335
|
TRAP1-018 | protein_coding | Homo_sapiens | 5e-19 | 99 |
