C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ganglioside-induced differentiation-associated-protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000150457 Gdap1-002 ENSMUSG00000025777 10090 + 1:17145404-17158744 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonKidneyOvaryTestisENSMUST00000150457
Transcript ID Adrenal Breast Colon Kidney Ovary Testis
ENSMUST00000150457 0.330±0.14 0.068±0.00 0.158±0.09 0.031±0.00 0.171±0.00 0.245±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00008Q CIL_00008Q_0003 CGP 1:16964560-17164271
CIL_00008K CIL_00008K_0003 CGP 1:17145362-17630939

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000220822 GDAP1-001 protein_coding Homo_sapiens 0 610
ENST00000434412 GDAP1-002 protein_coding Homo_sapiens 0 496
ENST00000522568 GDAP1-003 nonsense_mediated_decay Homo_sapiens 8e-35 152
ENST00000524366 GDAP1-004 processed_transcript Homo_sapiens 0 370

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