C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ganglioside-induced differentiation-associated-protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000025777 Gdap1 10090 + 1:17145362-17164271 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000026879 Gdap1-001 17145362-17164271 protein_coding
  ENSMUST00000150457 Gdap1-002 17145404-17158744 retained_intron
  ENSMUST00000189465 Gdap1-004 17158370-17162049 retained_intron
  ENSMUST00000189736 Gdap1-003 17145468-17161631 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026879ENSMUST00000150457ENSMUST00000189465ENSMUST00000189736
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026879 0.051±0.00 0.310±0.15 0.126±0.03 14.089±3.65 0.170±0.06 0.255±0.15 0.032±0.02 0.040±0.01 0.010±0.01 0.024±0.01 1.885±0.59 0.236±0.05 0.023±0.01 0.318±0.08
ENSMUST00000150457 N/A 0.330±0.14 N/A N/A 0.068±0.00 0.158±0.09 N/A 0.031±0.00 N/A N/A N/A 0.171±0.00 N/A 0.245±0.15
ENSMUST00000189465 0.011±0.00 0.133±0.08 0.022±0.00 N/A 0.037±0.01 0.048±0.00 0.017±0.00 0.013±0.00 0.005±0.00 0.036±0.00 N/A N/A 0.006±0.00 0.304±0.00
ENSMUST00000189736 0.040±0.00 0.208±0.04 N/A 56.847±0.00 N/A N/A N/A 0.043±0.02 N/A N/A N/A 0.395±0.34 0.130±0.00 2.503±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00008Q CIL_00008Q_0003 CGP 1:16964560-17164271
CIL_00008K CIL_00008K_0003 CGP 1:17145362-17630939

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000266 ISS mitochondrial fission
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0006626 ISS protein targeting to mitochondrion
GO:0016020 IEA membrane
GO:0031307 ISS integral component of mitochondrial outer membrane
GO:0032526 IDA response to retinoic acid

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058601 gdap1 ganglioside-induced differentiation-associated protein 1 protein_coding Danio_rerio
ENSG00000104381 GDAP1 ganglioside induced differentiation associated protein 1 protein_coding Homo_sapiens

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