C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ganglioside induced differentiation associated protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000220822 GDAP1-001 ENSG00000104381 9606 + 8:74350382-74366876 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainHeartKidneyLungOvaryTestisENST00000220822
Transcript ID Adipose Bladder Brain Heart Kidney Lung Ovary Testis
ENST00000220822 0.223±0.00 0.895±0.00 17.060±0.78 0.212±0.00 0.429±0.00 1.206±0.00 1.180±0.61 1.203±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002OK CIL_0002OK_0001 CGP 8:73991352-74321328
CIL_00008Q CIL_00008Q_0002 CGP 8:74234700-74488872
CIL_00008K CIL_00008K_0002 CGP 8:74321130-74855029

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000266 IDA mitochondrial fission
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0006626 IMP protein targeting to mitochondrion
GO:0008219 IEA cell death
GO:0016020 IDA membrane
GO:0031307 IDA integral component of mitochondrial outer membrane
GO:0032526 IEA response to retinoic acid

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026879 Gdap1-001 protein_coding Mus_musculus 0 1483
ENSMUST00000189736 Gdap1-003 nonsense_mediated_decay Mus_musculus 0 1116
ENSMUST00000150457 Gdap1-002 retained_intron Mus_musculus 0 610
ENSMUST00000189465 Gdap1-004 retained_intron Mus_musculus 0 586

Loading