C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ganglioside induced differentiation associated protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000434412 GDAP1-002 ENSG00000104381 9606 + 8:74350418-74364604 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverENST00000434412
Transcript ID Liver
ENST00000434412 0.165±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002OK CIL_0002OK_0001 CGP 8:73991352-74321328
CIL_00008Q CIL_00008Q_0002 CGP 8:74234700-74488872
CIL_00008K CIL_00008K_0002 CGP 8:74321130-74855029

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000266 IDA mitochondrial fission
GO:0005634 IDA nucleus
GO:0006626 IMP protein targeting to mitochondrion
GO:0008219 IEA cell death
GO:0016020 IDA membrane
GO:0031307 IDA integral component of mitochondrial outer membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026879 Gdap1-001 protein_coding Mus_musculus 0 1371
ENSMUST00000189736 Gdap1-003 nonsense_mediated_decay Mus_musculus 0 1116
ENSMUST00000189465 Gdap1-004 retained_intron Mus_musculus 0 586
ENSMUST00000150457 Gdap1-002 retained_intron Mus_musculus 0 496

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