C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear prelamin A recognition factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000577812 NARF-008 ENSG00000141562 9606 + 17:82458712-82488259 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonLungOvaryENST00000577812
Transcript ID Adipose Adrenal Brain Breast Colon Lung Ovary
ENST00000577812 2.915±0.00 7.482±0.00 0.557±0.00 2.780±0.00 0.707±0.00 0.389±0.00 3.351±2.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00043T CIL_00043T_0002 CGP 17:82442589-82490537
CIL_00054L CIL_00054L_0001 CGP 17:82458180-82644662

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000103015 Narf-001 protein_coding Mus_musculus 0 797
ENSMUST00000154047 Narf-002 retained_intron Mus_musculus 0 422
ENSMUST00000151088 Narf-003 retained_intron Mus_musculus 1.4013e-45 189

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