C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: collagen, type XVII, alpha 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000151102 Col17a1-003 ENSMUSG00000025064 10090 - 19:47648100-47649595 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonHeartKidneyLiverOvaryENSMUST00000151102
Transcript ID Adrenal Colon Heart Kidney Liver Ovary
ENSMUST00000151102 0.059±0.00 0.227±0.05 0.065±0.00 0.114±0.05 0.078±0.01 0.564±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006FI CIL_0006FI_0002 CGP 19:47579678-47692094
CIL_00095H CIL_00095H_0002 VISTA 19:47608459-48210596
CIL_0006FJ CIL_0006FJ_0002 CGP 19:47646344-47735588

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000353479 COL17A1-001 protein_coding Homo_sapiens 0 435
ENST00000369733 COL17A1-003 protein_coding Homo_sapiens 0 436

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