C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Src homology 2 domain containing F
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000151130 Shf-002 ENSMUSG00000033256 10090 - 2:122349128-122369137 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000151130
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000151130 0.586±0.01 0.714±0.30 0.768±0.00 1.631±0.28 1.647±0.70 0.165±0.03 1.373±0.00 0.870±0.29 0.300±0.08 0.205±0.07 1.796±0.19 1.083±0.59

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004DG CIL_0004DG_0002 CGP 2:122315672-122369162
CIL_0004NE CIL_0004NE_0002 CGP 2:122348892-122461137

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000089408 shdb-001 protein_coding Danio_rerio 0.00000001 66
ENST00000290894 SHF-001 protein_coding Homo_sapiens 0 817
ENST00000458022 SHF-008 protein_coding Homo_sapiens 0 1249
ENST00000558294 SHF-012 protein_coding Homo_sapiens 0 525
ENST00000558685 SHF-011 protein_coding Homo_sapiens 0 254
ENST00000559566 SHF-009 protein_coding Homo_sapiens 0 802
ENST00000560471 SHF-006 protein_coding Homo_sapiens 0 942
ENST00000560540 SHF-002 protein_coding Homo_sapiens 0 1766
ENST00000560734 SHF-004 protein_coding Homo_sapiens 0 937
ENST00000561091 SHF-014 processed_transcript Homo_sapiens 0 438
ENST00000561239 SHF-013 protein_coding Homo_sapiens 0 355

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