C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Src homology 2 domain containing F
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000560734 SHF-004 ENSG00000138606 9606 - 15:45167251-45187952 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeHeartKidneyLiverMuscleOvaryENST00000560734
Transcript ID Adipose Heart Kidney Liver Muscle Ovary
ENST00000560734 1.998±0.00 1.569±0.00 1.833±0.00 4.450±0.00 0.867±0.00 9.003±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004DG CIL_0004DG_0001 CGP 15:45129933-45201175
CIL_0004NE CIL_0004NE_0001 CGP 15:45167214-45277845

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000125826 Shf-003 protein_coding Mus_musculus 0 937
ENSMUST00000151130 Shf-002 protein_coding Mus_musculus 0 937
ENSMUST00000110531 Shf-201 protein_coding Mus_musculus 0 719
ENSMUST00000110532 Shf-004 protein_coding Mus_musculus 0 599
ENSMUST00000139819 Shf-005 protein_coding Mus_musculus 0 436
ENSMUST00000048635 Shf-001 protein_coding Mus_musculus 0 436
ENSMUST00000121237 Shf-008 protein_coding Mus_musculus 0 357
ENSMUST00000110530 Shf-007 protein_coding Mus_musculus 0 357
ENSMUST00000143484 Shf-009 protein_coding Mus_musculus 6.00036e-42 176

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