C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 1, catalytic subunit, gamma isoform
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000151184 Ppp1cc-006 ENSMUSG00000004455 10090 + 5:122171924-122175265 processed_transcript

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TJ CIL_0008TJ_0002 VISTA 5:121625608-122227679
CIL_000903 CIL_000903_0002 VISTA 5:121732502-122333355
CIL_0008YU CIL_0008YU_0002 VISTA 5:121792218-122394768

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000312989 PPP1CA-002 protein_coding Homo_sapiens 5e-37 159
ENST00000335007 PPP1CC-001 protein_coding Homo_sapiens 0 346
ENST00000340766 PPP1CC-002 protein_coding Homo_sapiens 0 599
ENST00000358239 PPP1CA-006 protein_coding Homo_sapiens 4e-37 159
ENST00000376745 PPP1CA-001 protein_coding Homo_sapiens 5e-37 159
ENST00000526510 PPP1CA-003 retained_intron Homo_sapiens 6e-37 159
ENST00000527663 PPP1CA-007 protein_coding Homo_sapiens 6e-29 132
ENST00000532279 PPP1CA-008 processed_transcript Homo_sapiens 2e-37 159
ENST00000532446 PPP1CA-004 processed_transcript Homo_sapiens 5e-37 159
ENST00000546904 PPP1CC-008 retained_intron Homo_sapiens 0 261
ENST00000546933 PPP1CC-004 protein_coding Homo_sapiens 0 255
ENST00000550261 PPP1CC-005 nonsense_mediated_decay Homo_sapiens 0 544
ENST00000550991 PPP1CC-010 protein_coding Homo_sapiens 3e-30 137
ENST00000551582 PPP1CC-007 protein_coding Homo_sapiens 1e-29 134
ENST00000551676 PPP1CC-009 protein_coding Homo_sapiens 3e-30 137
ENST00000553024 PPP1CC-006 retained_intron Homo_sapiens 0 255

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