C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: sodium channel, voltage-gated, type IX, alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000151234 Scn9a-004 ENSMUSG00000075316 10090 - 2:66540015-66543175 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartENSMUST00000151234
Transcript ID Heart
ENSMUST00000151234 0.029±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006CK CIL_0006CK_0002 CGP 2:66270781-66634962
CIL_0006CV CIL_0006CV_0002 CGP 2:66480080-66784914

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000303354 SCN9A-201 protein_coding Homo_sapiens 0 590
ENST00000409435 SCN9A-004 protein_coding Homo_sapiens 0 590
ENST00000409672 SCN9A-001 protein_coding Homo_sapiens 0 540
ENST00000452182 SCN9A-003 protein_coding Homo_sapiens 0 590
ENST00000454569 SCN9A-002 protein_coding Homo_sapiens 0 540

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