C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: vacuolar protein sorting 18 (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000151500 Vps18-003 ENSMUSG00000034216 10090 + 2:119288787-119298326 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainHeartLiverMuscleOvaryPlacentaTestisENSMUST00000151500
Transcript ID Bladder Brain Heart Liver Muscle Ovary Placenta Testis
ENSMUST00000151500 1.816±0.26 14.434±0.00 2.326±0.00 0.442±0.03 1.536±0.45 4.786±3.18 4.665±2.09 1.609±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000796 CIL_000796_0002 CGP 2:119269201-119298453
CIL_000799 CIL_000799_0002 CGP 2:119288740-119335962

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000220509 VPS18-001 protein_coding Homo_sapiens 0 3312
ENST00000558474 VPS18-004 protein_coding Homo_sapiens 0 324
ENST00000558855 VPS18-003 nonsense_mediated_decay Homo_sapiens 2e-40 171

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