C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | cleavage stimulation factor, 3' pre-RNA, subunit 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000151511  |
Cstf1-002 |
ENSMUSG00000027498 |
10090 | + |
2:172370681-172376070  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00099D | CIL_00099D_0002 | VISTA | 2:172130534-172731364 |
| CIL_0002PV | CIL_0002PV_0002 | CGP | 2:172356190-172382448 |
| CIL_0005JF | CIL_0005JF_0002 | CGP | 2:172370681-172433757 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005575 | ND | cellular_component |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000217109
|
CSTF1-001 | protein_coding | Homo_sapiens | 0 | 571 |
|
ENST00000415828
|
CSTF1-002 | protein_coding | Homo_sapiens | 0 | 586 |
|
ENST00000428552
|
CSTF1-006 | protein_coding | Homo_sapiens | 0 | 484 |
|
ENST00000452950
|
CSTF1-003 | protein_coding | Homo_sapiens | 0 | 571 |
|
ENST00000490539
|
CSTF1-005 | nonsense_mediated_decay | Homo_sapiens | 0 | 261 |
|
ENST00000493039
|
CSTF1-007 | nonsense_mediated_decay | Homo_sapiens | 0 | 261 |
|
ENST00000498689
|
CSTF1-004 | retained_intron | Homo_sapiens | 0 | 276 |
|
ENST00000613138
|
CSTF1-008 | processed_transcript | Homo_sapiens | 0 | 261 |
