C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000415828 CSTF1-002 ENSG00000101138 9606 + 20:56392371-56399357 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartLiverMuscleOvaryPlacentaTestisENST00000415828
Transcript ID Brain Colon Heart Liver Muscle Ovary Placenta Testis
ENST00000415828 1.452±0.00 2.612±0.00 1.441±0.00 1.562±0.00 0.339±0.00 3.647±0.00 2.134±0.43 4.343±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099D CIL_00099D_0001 VISTA 20:56155251-56756351
CIL_0002PV CIL_0002PV_0001 CGP 20:56369389-56406369
CIL_0005JF CIL_0005JF_0001 CGP 20:56392371-56460387

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000116375 Cstf1-001 protein_coding Mus_musculus 0 1192
ENSMUST00000151511 Cstf1-002 protein_coding Mus_musculus 0 586

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