C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000151768 Arhgef6-004 ENSMUSG00000031133 10090 - X:57231485-57240889 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000151768
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000151768 6.119±2.07 4.625±1.73 2.547±1.14 1.021±0.65 13.459±7.12 1.872±0.35 8.550±1.40 2.976±0.99 1.050±0.47 5.725±1.95 2.649±0.00 5.544±2.01 26.251±4.62

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000JT CIL_0000JT_0002 CGP X:57212143-57338729
CIL_0000PR CIL_0000PR_0003 CGP X:57231485-57393036

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000250617 ARHGEF6-001 protein_coding Homo_sapiens 0 305
ENST00000370620 ARHGEF6-003 protein_coding Homo_sapiens 0 305
ENST00000370622 ARHGEF6-002 protein_coding Homo_sapiens 0 305

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