C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0000JT_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000102245-ENSG00000129675 CGP 9606 X:136648193-136782088
GeneTranscriptPositionBiotype
ENSG00000102245 (CD40LG)
CD40 ligand
ENST00000370628 (CD40LG-002) 136648227-136660390 protein_coding
ENST00000370629 (CD40LG-001) 136648193-136660390 protein_coding
ENSG00000129675 (ARHGEF6)
Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6
ENST00000250617 (ARHGEF6-001) 136665547-136782088 protein_coding
ENST00000370620 (ARHGEF6-003) 136665547-136767343 protein_coding
ENST00000370622 (ARHGEF6-002) 136665547-136768627 protein_coding
CIL_0000JT_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031132-ENSMUSG00000031133 CGP 10090 X:57212143-57338729
GeneTranscriptPositionBiotype
ENSMUSG00000031132 (Cd40lg)
CD40 ligand
ENSMUST00000033466 (Cd40lg-001) 57212143-57224042 protein_coding
ENSMUSG00000031133 (Arhgef6)
Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6
ENSMUST00000033468 (Arhgef6-001) 57231485-57338729 protein_coding
ENSMUST00000114735 (Arhgef6-003) 57233440-57281594 protein_coding
ENSMUST00000134028 (Arhgef6-002) 57272228-57326601 retained_intron
ENSMUST00000135098 (Arhgef6-005) 57335904-57338506 retained_intron
ENSMUST00000151768 (Arhgef6-004) 57231485-57240889 retained_intron
ENSMUST00000175636 (Arhgef6-007) 57298512-57300859 processed_transcript
ENSMUST00000175900 (Arhgef6-008) 57239230-57251344 protein_coding
ENSMUST00000176986 (Arhgef6-006) 57248987-57326599 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000JT_0001ENSG00000102245ENST00000370628ENST00000370629ENSG00000129675ENST00000250617ENST00000370620ENST00000370622CIL_0000JT_0002ENSMUSG00000031132ENSMUST00000033466ENSMUSG00000031133ENSMUST00000033468ENSMUST00000114735ENSMUST00000134028ENSMUST00000135098ENSMUST00000151768ENSMUST00000175636ENSMUST00000175900ENSMUST00000176986
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000JT_0001ENSG00000102245ENST00000370628ENST00000370629ENSG00000129675ENST00000250617ENST00000370620ENST00000370622CIL_0000JT_0002ENSMUSG00000031132ENSMUST00000033466ENSMUSG00000031133ENSMUST00000033468ENSMUST00000114735ENSMUST00000151768ENSMUST00000175636ENSMUST00000175900ENSMUST00000176986
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000102245 ENST00000370628 N/A N/A 0.581±0.00 0.058±0.03 0.164±0.10 0.049±0.00 0.076±0.00 0.052±0.03 N/A 2.055±0.00 0.110±0.00 0.276±0.23 0.089±0.00 0.084±0.05
ENST00000370629 0.113±0.00 1.744±0.00 N/A N/A N/A 0.619±0.00 0.059±0.00 N/A 0.362±0.23 1.059±0.00 N/A 0.263±0.08 0.062±0.00 N/A
ENSG00000129675 ENST00000250617 4.583±0.00 N/A N/A 0.724±0.00 4.217±0.23 1.381±0.00 0.472±0.00 N/A 2.609±0.00 4.755±0.00 2.276±1.72 0.878±0.27 2.054±0.68 0.220±0.00
ENST00000370620 16.977±0.00 8.238±0.00 N/A 5.389±3.17 13.477±10.73 3.571±2.80 6.930±4.71 3.216±0.00 1.355±0.48 4.865±3.62 5.217±0.31 3.645±2.31 9.247±1.96 3.824±1.47
ENST00000370622 N/A N/A N/A N/A N/A N/A N/A 0.382±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031132 ENSMUST00000033466 0.086±0.05 0.109±0.00 0.056±0.00 N/A 1.929±0.46 0.216±0.09 0.076±0.02 0.130±0.08 0.075±0.05 0.252±0.04 0.100±0.00 0.076±0.06 0.022±0.00 0.107±0.04
ENSMUSG00000031133 ENSMUST00000033468 2.005±0.75 N/A 1.044±0.26 0.299±0.05 3.563±1.58 0.481±0.16 1.713±0.00 1.092±0.16 0.644±0.38 3.410±0.77 2.840±0.00 2.177±1.26 9.436±1.31 0.561±0.08
ENSMUST00000114735 N/A N/A N/A 2.323±0.00 N/A N/A N/A N/A N/A N/A N/A 10.094±0.00 125.994±3.98 10.219±6.43
ENSMUST00000134028 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135098 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151768 6.119±2.07 4.625±1.73 2.547±1.14 1.021±0.65 13.459±7.12 1.872±0.35 8.550±1.40 2.976±0.99 1.050±0.47 5.725±1.95 2.649±0.00 5.544±2.01 26.251±4.62 N/A
ENSMUST00000175636 N/A N/A N/A 1.856±0.00 N/A N/A N/A N/A 1.259±0.00 N/A N/A N/A N/A N/A
ENSMUST00000175900 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.147±0.89
ENSMUST00000176986 N/A 1.943±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 5.185±0.00 N/A N/A N/A

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