C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fibroblast activation protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000152085 Fap-004 ENSMUSG00000000392 10090 - 2:62501113-62573980 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000152085
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000152085 1.031±0.18 0.239±0.08 0.619±0.35 3.720±1.82 0.226±0.00 0.781±0.19 0.115±0.05 0.102±0.08 0.142±0.07 0.506±0.12 0.769±0.16 0.448±0.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003S0 CIL_0003S0_0003 CGP 2:62474530-62574075
CIL_0005KX CIL_0005KX_0002 CGP 2:62500943-62646255

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000188790 FAP-001 protein_coding Homo_sapiens 0 1375
ENST00000422436 FAP-004 nonsense_mediated_decay Homo_sapiens 0 1099
ENST00000443424 FAP-015 protein_coding Homo_sapiens 0 1375
ENST00000461506 FAP-010 retained_intron Homo_sapiens 0 532
ENST00000462608 FAP-014 nonsense_mediated_decay Homo_sapiens 0 206
ENST00000465088 FAP-011 retained_intron Homo_sapiens 0 278
ENST00000465424 FAP-008 retained_intron Homo_sapiens 1.4013e-45 187
ENST00000480044 FAP-005 retained_intron Homo_sapiens 0 560

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