C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CCR4-NOT transcription complex, subunit 6-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000152490 Cnot6l-005 ENSMUSG00000034724 10090 - 5:96075576-96086933 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonLiverOvaryTestisENSMUST00000152490
Transcript ID Adrenal Breast Colon Liver Ovary Testis
ENSMUST00000152490 3.660±0.19 2.258±0.73 3.535±1.66 1.278±0.00 4.550±0.81 0.626±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00069Y CIL_00069Y_0002 CGP 5:95956928-96164171
CIL_0007HW CIL_0007HW_0003 CGP 5:96070333-96266727

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000504123 CNOT6L-001 protein_coding Homo_sapiens 0 1694
ENST00000504804 CNOT6L-007 nonsense_mediated_decay Homo_sapiens 0 1581
ENST00000505983 CNOT6L-008 protein_coding Homo_sapiens 0 924
ENST00000508371 CNOT6L-009 retained_intron Homo_sapiens 0 558
ENST00000512485 CNOT6L-005 protein_coding Homo_sapiens 0 1585
ENST00000515506 CNOT6L-004 protein_coding Homo_sapiens 0 773
ENST00000559681 CNOT6LP1-001 processed_pseudogene Homo_sapiens 0 1267

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