C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | ubiquitin protein ligase E3 component n-recognin 3 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000152610  |
Ubr3-009 |
ENSMUSG00000044308 |
10090 | + |
2:69988786-70009188  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007VY | CIL_0007VY_0002 | VISTA | 2:69698509-70299848 |
| CIL_0004SI | CIL_0004SI_0002 | CGP | 2:69871198-70024013 |
| CIL_0004SH | CIL_0004SH_0002 | CGP | 2:69897246-70429198 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0001701 | IMP | in utero embryonic development |
| GO:0001967 | IMP | suckling behavior |
| GO:0005515 | IPI | protein binding |
| GO:0005575 | ND | cellular_component |
| GO:0042048 | IMP | olfactory behavior |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000272793
|
UBR3-001 | protein_coding | Homo_sapiens | 0 | 963 |
|
ENST00000392632
|
UBR3-008 | protein_coding | Homo_sapiens | 0 | 907 |
|
ENST00000418381
|
UBR3-201 | protein_coding | Homo_sapiens | 0 | 963 |
|
ENST00000430321
|
UBR3-003 | nonsense_mediated_decay | Homo_sapiens | 0 | 614 |
|
ENST00000439681
|
UBR3-007 | protein_coding | Homo_sapiens | 0 | 638 |
|
ENST00000444475
|
UBR3-005 | nonsense_mediated_decay | Homo_sapiens | 0 | 307 |
|
ENST00000465630
|
UBR3-006 | processed_transcript | Homo_sapiens | 0 | 191 |
|
ENST00000474426
|
UBR3-004 | retained_intron | Homo_sapiens | 0 | 303 |
