C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ubiquitin protein ligase E3 component n-recognin 3 (putative)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000444475 UBR3-005 ENSG00000144357 9606 + 2:170008840-170084131 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalKidneyLiverOvaryENST00000444475
Transcript ID Adrenal Kidney Liver Ovary
ENST00000444475 2.184±0.00 1.488±0.00 0.984±0.00 3.034±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VY CIL_0007VY_0001 VISTA 2:169713097-170314655
CIL_0004SI CIL_0004SI_0001 CGP 2:169810081-170084131
CIL_0004SH CIL_0004SH_0001 CGP 2:169827458-170655171

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000126165 Ubr3-005 processed_transcript Mus_musculus 0 2418
ENSMUST00000112251 Ubr3-201 protein_coding Mus_musculus 0 2074
ENSMUST00000055758 Ubr3-001 protein_coding Mus_musculus 0 2074
ENSMUST00000123890 Ubr3-003 processed_transcript Mus_musculus 0 776
ENSMUST00000150301 Ubr3-007 processed_transcript Mus_musculus 0 494
ENSMUST00000152610 Ubr3-009 protein_coding Mus_musculus 0 307
ENSMUST00000125608 Ubr3-006 processed_transcript Mus_musculus 0 294

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