C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin protein ligase E3 component n-recognin 3 (putative)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000392632 UBR3-008 ENSG00000144357 9606 + 2:169946310-170084120 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000392632
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000392632 1.864±0.00 2.964±0.13 3.539±0.00 3.281±0.00 6.407±0.00 3.171±0.00 2.160±0.00 2.445±0.00 19.572±0.00 1.535±0.31 1.257±0.07 3.296±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VY CIL_0007VY_0001 VISTA 2:169713097-170314655
CIL_0004SI CIL_0004SI_0001 CGP 2:169810081-170084131
CIL_0004SH CIL_0004SH_0001 CGP 2:169827458-170655171

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000112251 Ubr3-201 protein_coding Mus_musculus 0 4091
ENSMUST00000055758 Ubr3-001 protein_coding Mus_musculus 0 4013
ENSMUST00000126165 Ubr3-005 processed_transcript Mus_musculus 0 2037
ENSMUST00000152610 Ubr3-009 protein_coding Mus_musculus 0 907
ENSMUST00000123890 Ubr3-003 processed_transcript Mus_musculus 0 776
ENSMUST00000150301 Ubr3-007 processed_transcript Mus_musculus 0 494
ENSMUST00000125608 Ubr3-006 processed_transcript Mus_musculus 0 294

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