C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: tripartite motif-containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000153371 Trim3-006 ENSMUSG00000036989 10090 - 7:105618784-105633525 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalENSMUST00000153371
Transcript ID Adrenal
ENSMUST00000153371 6.049±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004A5 CIL_0004A5_0002 CGP 7:105591613-105633571
CIL_0004A8 CIL_0004A8_0002 CGP 7:105604463-105640416

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000345851 TRIM3-001 protein_coding Homo_sapiens 0 767
ENST00000359518 TRIM3-201 protein_coding Homo_sapiens 0 747
ENST00000525074 TRIM3-002 protein_coding Homo_sapiens 0 747
ENST00000528227 TRIM3-006 protein_coding Homo_sapiens 0 747
ENST00000528932 TRIM3-007 processed_transcript Homo_sapiens 0 496
ENST00000529058 TRIM3-009 processed_transcript Homo_sapiens 6e-29 132
ENST00000529529 TRIM3-005 protein_coding Homo_sapiens 0 420
ENST00000536344 TRIM3-202 protein_coding Homo_sapiens 0 496

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