C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: histone deacetylase 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000153945 Hdac3-002 ENSMUSG00000024454 10090 - 18:37936978-37954931 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000153945
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000153945 20.827±0.00 21.588±0.00 20.514±1.87 6.076±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006QD CIL_0006QD_0002 CGP 18:37843601-37954988
CIL_0006QE CIL_0006QE_0002 CGP 18:37935844-37959179

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000305264 HDAC3-001 protein_coding Homo_sapiens 0 778
ENST00000459727 HDAC3-012 processed_transcript Homo_sapiens 0 436
ENST00000467533 HDAC3-005 retained_intron Homo_sapiens 7e-23 111
ENST00000469207 HDAC3-013 processed_transcript Homo_sapiens 0 370
ENST00000469550 HDAC3-014 retained_intron Homo_sapiens 0 778
ENST00000475549 HDAC3-010 retained_intron Homo_sapiens 1.4013e-45 185
ENST00000486618 HDAC3-009 retained_intron Homo_sapiens 0 446
ENST00000491581 HDAC3-011 retained_intron Homo_sapiens 0 610
ENST00000495485 HDAC3-003 retained_intron Homo_sapiens 0 322

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