C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: valosin containing protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000154541 Vcp-004 ENSMUSG00000028452 10090 - 4:42984366-42985821 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainPlacentaENSMUST00000154541
Transcript ID Brain Placenta
ENSMUST00000154541 21.118±0.00 29.476±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002PW CIL_0002PW_0002 CGP 4:42949814-42983640
CIL_0005SG CIL_0005SG_0002 CGP 4:42969604-43000507
CIL_0005SF CIL_0005SF_0002 CGP 4:42979963-43010506

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000358901 VCP-001 protein_coding Homo_sapiens 0 464
ENST00000480327 VCP-007 retained_intron Homo_sapiens 0 375
ENST00000493886 VCP-005 retained_intron Homo_sapiens 0 464

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