C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CAP-GLY domain containing linker protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000154672 Clip1-011 ENSMUSG00000049550 10090 - 5:123579451-123617822 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000154672
Transcript ID Testis
ENSMUST00000154672 57.258±62.57

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002ZE CIL_0002ZE_0002 CGP 5:123528764-123684618
CIL_0002ZD CIL_0002ZD_0002 CGP 5:123577795-123721044

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000302528 CLIP1-001 protein_coding Homo_sapiens 0 1168
ENST00000358808 CLIP1-201 protein_coding Homo_sapiens 0 1168
ENST00000361654 CLIP1-007 protein_coding Homo_sapiens 0 1168
ENST00000501271 CLIP1-014 retained_intron Homo_sapiens 0 233
ENST00000536634 CLIP1-013 processed_transcript Homo_sapiens 0 496
ENST00000537123 CCDC150P1-001 processed_pseudogene Homo_sapiens 0 1262
ENST00000537178 CLIP1-002 protein_coding Homo_sapiens 0 1168
ENST00000538120 CLIP1-010 retained_intron Homo_sapiens 0 603
ENST00000540338 CLIP1-003 protein_coding Homo_sapiens 0 1168
ENST00000540539 CLIP1-015 protein_coding Homo_sapiens 0 228
ENST00000543205 CLIP1-009 retained_intron Homo_sapiens 0 377
ENST00000545889 CLIP1-008 protein_coding Homo_sapiens 0 1168
ENST00000620786 CLIP1-202 protein_coding Homo_sapiens 0 1168

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