C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000009777 GLRA3-201 ENSDARG00000011066 7955 - 1:38827489-38873612 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyMuscleENSDART00000009777
Transcript ID Brain Kidney Muscle
ENSDART00000009777 0.249±0.12 0.053±0.00 0.209±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005230 IEA extracellular ligand-gated ion channel activity
GO:0006810 IEA transport
GO:0006811 IEA ion transport
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000018739 Glra4-001 protein_coding Mus_musculus 0 407
ENSMUST00000075603 Glra1-003 protein_coding Mus_musculus 0 508
ENSMUST00000102716 Glra1-002 protein_coding Mus_musculus 0 508
ENSMUST00000108853 Glra1-001 protein_coding Mus_musculus 0 508
ENSMUST00000154833 Glra4-002 retained_intron Mus_musculus 0 324
ENST00000274576 GLRA1-001 protein_coding Homo_sapiens 0 484
ENST00000372617 GLRA4-001 protein_coding Homo_sapiens 0 409
ENST00000455880 GLRA1-004 protein_coding Homo_sapiens 0 484
ENST00000462581 GLRA1-002 nonsense_mediated_decay Homo_sapiens 0 484
ENST00000471351 GLRA1-003 processed_transcript Homo_sapiens 0 387
ENST00000480725 GLRA4-004 retained_intron Homo_sapiens 0 315

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