C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histone deacetylase 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000154872 Hdac8-004 ENSMUSG00000067567 10090 - X:102405647-102505081 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalLiverENSMUST00000154872
Transcript ID Adrenal Liver
ENSMUST00000154872 0.966±0.00 0.398±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006RM CIL_0006RM_0002 CGP X:102247381-102505359
CIL_0006RW CIL_0006RW_0002 CGP X:102284639-102644246

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000373554 HDAC8-005 protein_coding Homo_sapiens 0 211
ENST00000373556 HDAC8-003 protein_coding Homo_sapiens 0 217
ENST00000373559 HDAC8-008 protein_coding Homo_sapiens 0 195
ENST00000373560 HDAC8-007 protein_coding Homo_sapiens 0 211
ENST00000373568 HDAC8-006 protein_coding Homo_sapiens 0 499
ENST00000373571 HDAC8-004 protein_coding Homo_sapiens 0 638
ENST00000373573 HDAC8-001 protein_coding Homo_sapiens 0 710
ENST00000373589 HDAC8-201 protein_coding Homo_sapiens 0 499
ENST00000412342 HDAC8-013 nonsense_mediated_decay Homo_sapiens 0 859
ENST00000415409 HDAC8-012 protein_coding Homo_sapiens 0 405
ENST00000421523 HDAC8-009 protein_coding Homo_sapiens 0 339
ENST00000436675 HDAC8-017 nonsense_mediated_decay Homo_sapiens 0 405
ENST00000439122 HDAC8-002 protein_coding Homo_sapiens 0 640
ENST00000478743 HDAC8-016 processed_transcript Homo_sapiens 0 278

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