C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: brain and reproductive organ-expressed protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000155155 Bre-011 ENSMUSG00000052139 10090 + 5:31697996-31707789 processed_transcript

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00013J CIL_00013J_0002 CGP 5:31526995-31701972
CIL_00013K CIL_00013K_0002 CGP 5:31596935-31701972
CIL_0003JP CIL_0003JP_0003 CGP 5:31624439-32084962
CIL_0003JO CIL_0003JO_0003 CGP 5:31697684-32157831

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000342045 BRE-004 protein_coding Homo_sapiens 5.00264e-43 180
ENST00000344773 BRE-001 protein_coding Homo_sapiens 0 287
ENST00000361704 BRE-005 protein_coding Homo_sapiens 0 237
ENST00000379624 BRE-003 protein_coding Homo_sapiens 0 287
ENST00000379629 BRE-009 protein_coding Homo_sapiens 8.99634e-43 178
ENST00000379632 BRE-002 protein_coding Homo_sapiens 5.00264e-43 180
ENST00000436924 BRE-006 protein_coding Homo_sapiens 2.00386e-43 180
ENST00000448427 MRPL33-006 nonsense_mediated_decay Homo_sapiens 9.94922e-44 180
ENST00000492702 BRE-007 retained_intron Homo_sapiens 0 287
ENST00000496951 BRE-008 retained_intron Homo_sapiens 0 248
ENST00000604932 BRE-011 non_stop_decay Homo_sapiens 0.000000000002 77

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