C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | RAB5C, member RAS oncogene family | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000155500  |
Rab5c-003 |
ENSMUSG00000019173 |
10090 | - |
11:100719977-100738176  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0002IY | CIL_0002IY_0002 | CGP | 11:100713850-100738215 |
| CIL_0002J1 | CIL_0002J1_0002 | CGP | 11:100715009-100759942 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003924 | TAS | GTPase activity |
| GO:0005515 | IPI | protein binding |
| GO:0006184 | TAS | GTP catabolic process |
| GO:0007032 | IDA | endosome organization |
| GO:0030100 | IDA | regulation of endocytosis |
| GO:0030139 | IDA | endocytic vesicle |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000346213
|
RAB5C-001 | protein_coding | Homo_sapiens | 0 | 206 |
|
ENST00000393860
|
RAB5C-201 | protein_coding | Homo_sapiens | 0 | 207 |
|
ENST00000546881
|
RAB5C-007 | retained_intron | Homo_sapiens | 0 | 206 |
|
ENST00000547517
|
RAB5C-002 | protein_coding | Homo_sapiens | 0 | 207 |
|
ENST00000550013
|
RAB5C-003 | retained_intron | Homo_sapiens | 0 | 206 |
|
ENST00000550406
|
RAB5C-008 | protein_coding | Homo_sapiens | 0 | 207 |
|
ENST00000550504
|
RAB5C-004 | protein_coding | Homo_sapiens | 0 | 207 |
|
ENST00000552162
|
RAB5C-005 | protein_coding | Homo_sapiens | 0 | 206 |
|
ENST00000592248
|
CTD-2132N18.3-002 | nonsense_mediated_decay | Homo_sapiens | 2.00386e-43 | 180 |
|
ENST00000592574
|
CTD-2132N18.3-001 | protein_coding | Homo_sapiens | 0 | 206 |
