C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: apolipoprotein D
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000155682 Apod-005 ENSMUSG00000022548 10090 - 16:31297513-31303678 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonKidneyLiverOvaryPlacentaTestisENSMUST00000155682
Transcript ID Brain Colon Kidney Liver Ovary Placenta Testis
ENSMUST00000155682 46.888±0.00 0.392±0.07 0.419±0.00 0.037±0.02 1.197±0.29 1.674±0.00 0.316±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006CD CIL_0006CD_0002 CGP 16:31251537-31314808

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000343267 APOD-001 protein_coding Homo_sapiens 0 257
ENST00000421243 APOD-005 protein_coding Homo_sapiens 0 257
ENST00000453131 APOD-004 protein_coding Homo_sapiens 0 257
ENST00000458447 APOD-003 nonsense_mediated_decay Homo_sapiens 0 259
ENST00000463719 APOD-002 retained_intron Homo_sapiens 3.99931e-42 176

Loading